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CMEIAS Citation Info

CMEIAS Image Tool Ver. 1.28

If you acquire image analysis data using CMEIAS/ImageTool Ver. 1.28, we ask that you cite us in the following way:

"Digital images were analyzed using CMEIAS Ver. 1.28 (Liu et al. 2001) operating in UTHSCSA ImageTool Ver. 1.28 (Wilcox et al. 1997)."


1) Liu J., F.B. Dazzo, O. Glagoleva, B. Yu, A.K. Jain. 2001. CMEIAS: A computer-aided system for the image analysis of bacterial morphotypes in microbial communities. Microbial Ecology 41(3): 173-194 and 42: 215. (Link to the PubMed abstract - PMID: 11391457)

2) Wilcox C.D., S.B. Dove, W. Doss-McDavid, and D.B. Greer. 1997. UTHSCSA ImageTool Ver. 1.28, Univ. of Texas Health Science Center, San Antonio, TX, USA.

CMEIAS Color Segmentation Ver. 1.0

An appropriate reference to cite when using CMEIAS Color Segmentation to edit images is:

Gross C.A., C.K. Reddy, F.B. Dazzo. 2010. CMEIAS color segmentation: an improved computing technology to process color images for quantitative microbial ecology studies at single-cell resolution. Microbial Ecology 59(2): 400-414. DOI: 10.1007/s00248-009-9616-7

CMEIAS Quadrat Maker Ver. 1.0

An appropriate reference to cite when using CMEIAS Quadrat Maker is:

Dazzo, F.B. and C.A. Gross. 2013. CMEIAS Quadrat Maker: a digital software tool to optimize grid dimensions and produce quadrat images for landscape ecology spatial analysis. J. Ecosystem Ecography 3(136): 1-4. DOI: 10.4172/2157-7625.1000136

CMEIAS JFrad Ver. 1.0

An appropriate reference to cite when using CMEIAS JFrad is:

Ji, Z., K. J. Card, F. B. Dazzo. 2015. CMEIAS JFrad: a digital computing tool to discriminate the fractal geometry of landscape architectures and spatial patterns of individual cells in microbial biofilms. Microbial Ecology 69: 710-720. DOI: 10.1007/s00248-014-0495-1.